E. coli expression services

Protein expression form

    Optimize your chance to produce your recombinant protein efficiently! Our service of protein production in E. coli includes up to 32 protein expression tests in standard to guarantee that even the most difficult-to-express proteins have a high probability to be produced.

    What is our secret for an optimized
    protein production in E. coli?

    Protein expression in E. coli price

    Competitive price

    Our E. coli production package starts from 1650€.

    32 protein expression tests

    32 expression tests

    Our protein expression packages include up to 32 expression conditions tests at that price.

    Quality guaranteed

    Our E. coli protein production package includes a wide range of QC analysis.

    Gene optimization tool

    As a gene synthesis expert, ProteoGenix can include gene synthesis and efficient codon optimization to its E. coli protein production.

    Small to large scale production

    We provide from milligram to gram protein expression in E. coli.

    PhD account managers

    Our PhD account managers are at your disposal to guide you through our solution of protein expression in E. coli.

    What are the 32 tests included in our
    E.coli protein expression service?

    Recombinant protein production is highly technical and requires strong expertise as one production protocol cannot fit all product types. With more than 16 years of experience and 1500+ proteins expressed, ProteoGenix developed an in-house protocol including up to 32 expression conditions tests in its package of “Protein production in E. coli” to meet the best your requirements. The technical possibilities are almost infinite and such a long lasting experience is decisive.

    Varying expression conditions include:

    • E. coli strains

    • Temperature

    • Induction time

    • Protein extraction method

    • Purification method

    E. coli protein production tests
    High yield protein expression

    You need to produce a protein in E. coli or want more information about our capacities of protein expression in E. coli? Our account manager is at your disposal to answer to your questions.
    For difficult to express proteins we also have a dedicated high throughput screening service that allow to increase the probability to find the most optimal conditions. The more conditions are tested, the higher the probability to ensure optimal solubility, functionality, productivity…
    All conditions are varied from codon optimizations, vectors with different promoters, protein sequences, purification tags down to the purification method itself, tag clivage conditions, refolding method and formulation. The advantage of protein expression in E. coli is the infinite range of solution and technology and ProteoGenix has a wide experience of all these technologies thanks to the large variety of project carried out until now.

    Flowchart of our protein expression in E. coli

    Optimization for protein production in E. coli
    • Expression vector construction

    Gene synthesis including codon optimization for E. coli production.
    Gene subcloning in a high producing expression vector.

    Recombinant protein expression in escherichia coli
    • E. coli strain transformation

    Transformation of the plasmid into various bacterial strains.

    Protein expression conditions
    • Test of 32 protein expression conditions

    Evaluation of 32 protein expression conditions (temperature, induction time, fractions).
    Determination of the best protein production conditions.
    Protein purification tests.

    Protein production in E. coli
    • Protein expression scale up and purification

    1L protein expression and purification with optimized conditions previously determined.

    High quality bacterial production
    • QC analysis

    SDS/PAGE analysis and WB.
    Quantitative analysis by Bradford method.

    Protein production in E. coli: service content

    Step Content Timeline Deliverables
    Gene synthesis
    • Gene design including
    • codon optimization
    • Gene synthesis
    • Subcloning in expression
    • vector
    3 to 4 weeks
    • Gene optimized for the desired expression system
    • Gene cloned in a plasmid
    Small scale protein
    expression evaluation
    • Plasmid transformation
    • Test of 32 protein expression
    • conditions
    • Purification tests
    • QC analysis
    2 to 3 weeks
    • Detailed reportincluding optimal protein production protocol
    Protein production scale up
    • 1L protein expression
    • Protein purification
    • QC analysis
    2 to 3 weeks
    • Purified protein from 1L culture Detailed report
    Options available:
    • Tag elimination via enzymatic cleavage
    • Additional purification steps (IEC, SEC…)
    • Endotoxin assay and removal
    • Scale up production / Fermentation

    Case study: protein expression in E. coli

    Aim of the project

    One of our customers requested a recombinant protein production in E. coli. This project included also gene synthesis and subcloning in an expression vector (information included in the PDF report).

    Protein expression tests

    The aim of the protein expression tests is to determine the optimal conditions for protein expression by evaluation of:

    • E. coli strain used for protein production

    • Induction strategy

    • Temperature

    • Induction time

    • Best protein extraction condition (native or denatured)

    More details about the protocol are provided in the complete PDF report.

    E. coli protein expression tests

    Figure 1 : Expression tests of the target protein. Coomassie blue staining Reducing-PAGE analysis of NPE and DPE. MW. Molecular weight marker. Ø. Non-induced bacteria culture (negative control). Induction with IPTG 1mM.

    The protein is expressed at high level in all strains tested, and is mainly localized in NPE (Figure 1). The optimal conditions for native expression are indicated in the complete PDF report.

    Small scale protein purification tests

    A small-scale (200ml culture) purification test was performed in native conditions. Starting material: NPE prepared after optimal native expression. Details about the protein purification protocol are available in the complete PDF report.

    E. coli protein expression tests

    Figure 2 Purification test of the target protein. Reducing-PAGE analysis with Coomassie blue staining A. Purification profile. B. Final sample QC (after buffer exchange) MW. Molecular weight marker. IN. Input. FT. Flow through. W1-W3. Wash steps. E1-E9. Eluted fractions.

    The target protein was purified in native conditions (Figure 2). The yield and purity obtained are detailed in the Table 1.


    Strain No.




    No.1 90% 146


    Table 1: Production and purification yields Final buffer: TBS pH8.0. **Estimates based on the 200ml-culture tests. *Based on the 2µg loadings in Figures 2B (green arrows)

    Protein production in E. coli: pros and cons

    E. coli is a well-characterized organism for protein production and was the first host expressing an approved therapeutic recombinant protein.

    Until the middle of the 90’s, E. coli was considered as the best choice for biopharmaceutical production due to several advantages such as:

    • Fast growth kinetics,

    • Possibility to achieve high-cell density cultures,

    • Fast and easy plasmid transformation.

    These advantages make E. coli the best choice if you are looking for a fast and cost effective protein expression solution.

    However, protein production in E. coli may not be the most relevant solution for the expression of complex protein structures including post-translational modifications or biotherapeutic productions due to high levels of endotoxin (which can be removed thanks to our endotoxin removal service).

    To get more information about our protein production in E.coli platform, please feel free to contact our dedicated account manager.

    Exploiting inclusion bodies for high
    yield protein expression in E. coli

    Inclusion bodies are often considered as a bottleneck in recombinant protein production but they are often related to high protein expression levels. Several approaches have been developed to limit their formation but only irregular results have been obtained because protein production is product dependent. It is for instance possible to produce at low temperature using specific strains. However, inclusion bodies can present several advantages:

    • They prevent proteins from proteolysis

    • They protect the host cell when the recombinant protein is toxic in native conformation

    • They are mainly composed of recombinant protein

    • They are easy to purify

    Thus, many microbiologists developed protein refolding protocols allowing the exploitation of these inclusion bodies as a source of recombinant proteins.

    At ProteoGenix, we developed a unique protein refolding platform tailored to best exploit recombinant protein expression and meet your requirements. To get more information about it, please feel free to contact our dedicated account managers.